You won't have the possibility to copy the files if the software is started and the files are loaded into the application, but if you close the software and then use a flash drive to copy the files, everything should be good.
I've checked the software, and it appears that it doesn't have any restrictions regarding file copy and any other related to that.
To be extra sure, just close down all the apps running in the background and then copy the files because there is no other special way to do this.